Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015886241.1_cds_XP_016440352.1_35824
CDS Infomation	[gene=LOC107766126] [db_xref=GeneID:107766126] [protein=DNA-directed RNA polymerase IV subunit 1-like isoform X2] [protein_id=XP_016440352.1] [location=join(113511..113518,114970..115099,115207..115302,115393..117279,118754..118923,119020..119086,119163..119281,119442..119587,120863..121122,121309..121482,121688..121825,122637..122893,124922..125033,125473..125673)] [gbkey=CDS]
Sequence	ATGCTCAGCATTCTGAAAGATGTTGATCCAGGGTTTCTTGAAGGACTTCTCAGAAGGAAG AACTCAATCTTCCTTAAAAGCTGCCTCTTGACTCCCAATAGTCATCGTGTCACAGAATTT GGGCAGCACATGATATTTGATGAGAGTAATAGGCTTTACAGAAAGCTGATTGACTTCAGA GGGACAGCAAATGACTTGAGCATGTGTGTTTTTAATAGAATTAAAGTTTCCAAGATACGT GCGGAGAGGTCACTAACCAACGATCCTAATGCCCCTGCTACTGGTTTGAAGTATGTGAAA GAACTGGTTCTGGCAAAACGCACTAACCATGCTTTCCGCATGGTTGTGGTTGGTGATCCC AACATAAAGCTAGGTGAGATTGGTATTCCGTGTCATGTTGCGGAGGATCTCCATATGGCG GAACCCCTAAGTTCACGGAATTGGGAAAAGTTGACTGATCACTGTGATCTTATGATTCTT CAGAAGGGGGCGATTCACGTTCGTAGAAATGGTGTCTTAGTTCGTATTAGTGTAATGGAT CAGTTGCAGAGAGGGGATATAATATATAGACCTCTTATTGATGGAGATGTTGTGTTGATA AATCGACCTCCATCTATTCATCAACACTCACTAATTGCTCTGTCTGTTAGGATTCTTCCA ATAATTTCTGTTCTTTCAATCAATCCTCTTGTGTGTTCTCCATTCCGTGGGGATTTTGAT GGTGATTGCCTTCATGGTTATGTTCCGCAATCAATCGATTCTAGGGTTGAGCTTAGTGAG CTTGTTGGTCTGAATCGGCAGCTTATCGACGGACAGAGTGGCCAAAATCTTCTTTCGTTA AGTCATGACAGCTTAACTGCTGCTCATTTAGTTTTGGAAGAAGGAGTTTTCTTGGACCGT TTCCAGGTGCAGCAGCTACAAATGTTTTGTCCTCATCAAGTGGGGATGCCTGCTATTGTA CAGGCACCATTAAGAAACAGGAGTTATTGGACTGGGAAACAGTTATTCAGCTTGTTTTTG CCATCAGACCTTGACTGTGATTTTCCATCAAATGGCGTCTGTATTAGTGATGGGGAAATT GTGACATCTTCCGGTGGTTCTTCTTGGCTGCGTGATGCCAGTGAAAATCTCTTTTATAGT CTTGTTAAACACCATGGAGGTGACACTCTTGACCTCCTTTATGCTGCACAAGCAGTTCTT TGTGAGTGGTTGTCAATGAGGGGTCTTAGTGTTTCATTGTCCGATCTTTACATCTCTTCT GATCCATATTCTCGAGAAAATATGATTGATGAAGTCTTTTGCGGTTTGCAAGAGGCAGAG CGACTATCTTATATCCAACTGCTGATGTCGAGGTATAATCACGATTTCCTTGCCGGAAGC CTAGAAGTAAGCCAGAAAGCCATGGGTTTTAATTTGGAGTTTATGTCTATCATGCAGCAG AAGTCAGCTTCTCTGAGTCAAGCTTCTGTTAGTTCTTTCAAGCATGTTTTTCGGGATATC CAGAATTTAGTATATAATTATGCAAGCAAGGAGAATTCGTTTCTGGCTATGTTAAAAGCT GGGAGTAAGGGCAACCTGCTAAAACTGGTCCAACACAGCATGTGTCTTGGTTTGCAGCAG TCTTTGGTTCCATTATCGTTTAGAATGCCGCGTCGACTTTCTTGTGATGCATGGAATAAT CATAAAGCACATCTTCCTTTTGAGAAAGCTCATAATGTTCCTGAACGTCCTGGTCCTTAC ATCCCGTGTGCTGTGGTTGAGAATTCATTTCTTGCGGGTTTGAATCCTCTAGAGTGTTTC GTGCATTCATTGACAACCCGTGATAGTTCTTTTAGTGGACATGCTGATGTTTCCGGAACA TTGAACCGTAAGCTTATGTTTTTCATGCGTGATCTGTACAGTGGATACGATGGAACAGTG AGAAATGCTTACGGGAATCAAATTGTGCAGTTCTCTTACTACAGCGCAGAACAAATTTCT TCTACATATAACCGTGCTTCTCATGCAATTGGTGGCCATCCTGTTGGTTCATTGGCAGCC TGTGCCATTTCAGAAGCTGCATACAGTGCTTTGGATCTACCTGTCGGTGCACTTGAGCCA TCACCTTTACTAAACCTAAAGAAAATATTGGAAGCTGGAGTAAAGAGTAATAGTAGCGAG AAAACTGCAACTCTGTTTCTTTCGAGAAGACTTGGCAGATGGGCTCATGGTTTTGAATAT GGAGCTATAGAGGTCAAGGGTCATCTAGAAAGGCTTCTTCTTTCAGATATTGTTTCAACC GTAATGATATGCTTCTCCCCTGAAACATGTAAAAGCACTCACAGTAGTCCCTGGGTTTGT CATTTTCATATAGATAAGGAATATGTGAAGACAAGAAGGCTGAAGCTGAAATCAGTAATA GATGCTCTTAATATGAGATATAGATCAACTAGAATGGAAGCTGGAATTGATCTTCCAAGC CTGCATATAACATGCAAGGATTGTTCAGCCGCTGAAATGCAAAAAGCGAATTCCAAAATT TGCATCGCAGTTGCTGTGGTTGAGACCTCAAAAGATTCTTTTTCACTACTGGATACACTT CGTGATTTGGTGATTCCATTCCTTCTTGAGACTGTGATCAAAGGTTTCTCCGCATTTAAA AAAGTTGATATCTTATGGAGAGAGTTGCCAAGTACATCAAAATCTTCCAGAGGCTCTACC GGGGAACTATATTTGCAGGTCTTCATGTCGGAAAGTTGTGACCGGAACAACTTTTGGAAT GCACTTGTGGATAGTTGCCTCCATATAATGGATTTGATTGATTGGGAGCGGAGTCATCCC GATAACGTCCATGATCTGACTGTAGCCTATGGAGTTGATGTAGCATGGAAGTACTTTCTA CGTAATCTAAATTCTGCTGTCTCTGAAACTGGCAAGAAAATCCTTCCGGAACACTTGGTA CTTGCAGCAGATTGTCTCACAGCTACAGGAGAATTTGTTCCGTTGAATACAAAAGGGCTG GCACAGCAAAGAAAGTGTGCTGGTGTTATTTCACCATTTATGCAAGCGTGCTTTTCGCAT CCCGGGGACTCTTTTGTTAGGGCTGCCAAGACAGAATTAAGTGATGATCTTCAAGGAAGT CTGGAAGCATTGGCGTGGGGAAAAACCCCTTCCACAGGGACTGGTTTTTCATTTGACATT ATCTATTCTGAAAAGGGATATGAGCCTGCTGCACCAACAGATGTGTATGCTCTGCTGGGC AACCACGTCACATCAAATAGACAAAAGGTGAAGGTCACTCTTGACGAAGACAATGAAACG GCTGACAAGGCTCTTGCACGACGTCTTTGTAAACTTGATGATCTCAATACAAAGAGATGT AAAAGCCAGTGGTCAATTGCAAATTTGAGAAGTTTCCTTTCATTCAATGACATAAAGAAG CTCTCTCAGGCATTGAAGCAAATGTTGTCCAAATATGCTATTGATCGCGAGTTAAGTGAA GCAGACAAGTCCATAGTAATGATGGCATTACATTTTCATCCCAGAAGGAGTGAGAAGATC GGAAAAGGAGCAATGGAAATAAAGATTGGTTACCACAAAGAATATGAAGATTCCCGTTGC TTTATGTTGGTACGTACAGATGGAACAGTTGAAGATTTCTCGTATCGTAAGTGTCTACAA CATGCTCTGGAACTAATTGCTCCTCAAAAGGCAAAAACCTATAAATGGTTGAATGGAGCA TCGCGTGGTCCCACTGCCTCATCCTTGCAAAATGAGGTCAAGTAA

Peptide Sequence

PEP ID	XP_016440352.1
PEP Infomation	PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2 [Nicotiana tabacum]
Sequence	MLSILKDVDPGFLEGLLRRKNSIFLKSCLLTPNSHRVTEFGQHMIFDESNRLYRKLIDFR GTANDLSMCVFNRIKVSKIRAERSLTNDPNAPATGLKYVKELVLAKRTNHAFRMVVVGDP NIKLGEIGIPCHVAEDLHMAEPLSSRNWEKLTDHCDLMILQKGAIHVRRNGVLVRISVMD QLQRGDIIYRPLIDGDVVLINRPPSIHQHSLIALSVRILPIISVLSINPLVCSPFRGDFD GDCLHGYVPQSIDSRVELSELVGLNRQLIDGQSGQNLLSLSHDSLTAAHLVLEEGVFLDR FQVQQLQMFCPHQVGMPAIVQAPLRNRSYWTGKQLFSLFLPSDLDCDFPSNGVCISDGEI VTSSGGSSWLRDASENLFYSLVKHHGGDTLDLLYAAQAVLCEWLSMRGLSVSLSDLYISS DPYSRENMIDEVFCGLQEAERLSYIQLLMSRYNHDFLAGSLEVSQKAMGFNLEFMSIMQQ KSASLSQASVSSFKHVFRDIQNLVYNYASKENSFLAMLKAGSKGNLLKLVQHSMCLGLQQ SLVPLSFRMPRRLSCDAWNNHKAHLPFEKAHNVPERPGPYIPCAVVENSFLAGLNPLECF VHSLTTRDSSFSGHADVSGTLNRKLMFFMRDLYSGYDGTVRNAYGNQIVQFSYYSAEQIS STYNRASHAIGGHPVGSLAACAISEAAYSALDLPVGALEPSPLLNLKKILEAGVKSNSSE KTATLFLSRRLGRWAHGFEYGAIEVKGHLERLLLSDIVSTVMICFSPETCKSTHSSPWVC HFHIDKEYVKTRRLKLKSVIDALNMRYRSTRMEAGIDLPSLHITCKDCSAAEMQKANSKI CIAVAVVETSKDSFSLLDTLRDLVIPFLLETVIKGFSAFKKVDILWRELPSTSKSSRGST GELYLQVFMSESCDRNNFWNALVDSCLHIMDLIDWERSHPDNVHDLTVAYGVDVAWKYFL RNLNSAVSETGKKILPEHLVLAADCLTATGEFVPLNTKGLAQQRKCAGVISPFMQACFSH PGDSFVRAAKTELSDDLQGSLEALAWGKTPSTGTGFSFDIIYSEKGYEPAAPTDVYALLG NHVTSNRQKVKVTLDEDNETADKALARRLCKLDDLNTKRCKSQWSIANLRSFLSFNDIKK LSQALKQMLSKYAIDRELSEADKSIVMMALHFHPRRSEKIGKGAMEIKIGYHKEYEDSRC FMLVRTDGTVEDFSYRKCLQHALELIAPQKAKTYKWLNGASRGPTASSLQNEVK

Transcript Sequence

Gene sequence data has not been registered.